SNP Profiles of PA 4 [PER]   View Data

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 Key

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_Input profile
TTCCAAGGCCGGAACCAGCCGGGGAACC
1._RUQ_1058
__AA_____AG_GG___
2._PA_4_[PER]_Fld#_89_Plt#_1
AACCAACCGGGGAAGGAGGGGGGGAAGG
 1516171819202122232425262728
_Input profile
AGACCTGTCGCCCTTTCCGGAGTTAAGG
1._RUQ_1058
_AC__CGCCCT_CCGGAG_AAGG
2._PA_4_[PER]_Fld#_89_Plt#_1
_AC__CGCCAGAA_CCAGAAAACC
 2930313233343536373839404142
_Input profile
CCCCAACCCCGGGGTTTTCCCCTTCCAG
1._RUQ_1058
__AACC____TT___CC_
2._PA_4_[PER]_Fld#_89_Plt#_1
_GGAA_GGCCGG_AAGGGGAAGGAG

Input profile: PA_4_[PER] RUQ_1058

 
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

1._PA_4_[PER] RUQ_1058

identical
16 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

2._PA_4_[PER] PA_4_[PER]_Fld#_89_Plt#_1

45.7 %
35 shared markers

USDA-TARS, United States of America
Location: Field: 89, Tree: 1
 Mars, 2018

 


  Key to SNP Markers

1TcSNP75 2TcSNP90 3TcSNP144 4TcSNP150 5TcSNP151
6TcSNP174 7TcSNP193 8TcSNP226 9TcSNP230 10TcSNP242
11TcSNP329 12TcSNP364 13TcSNP372 14TcSNP448 15TcSNP469
16TcSNP529 17TcSNP534 18TcSNP560 19TcSNP577 20TcSNP591
21TcSNP602 22TcSNP619 23TcSNP702 24TcSNP723 25TcSNP731
26TcSNP799 27TcSNP823 28TcSNP872 29TcSNP878 30TcSNP891
31TcSNP998 32TcSNP999 33TcSNP1060 34TcSNP1063 35TcSNP1111
36TcSNP1126 37TcSNP1253 38TcSNP1309 39TcSNP1439 40TcSNP1442
41TcSNP1458 42TcSNP1484